BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F03LP1|AL428752
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1293 1748 0.0
>3x_Contig1293
Length = 6455
Score = 1748 bits (882), Expect = 0.0
Identities = 882/882 (100%)
Strand = Plus / Minus
Query: 1 gatcaaaagatctcttctagtaaaccttctctcacaaataccacaaacataaggtttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4425 gatcaaaagatctcttctagtaaaccttctctcacaaataccacaaacataaggtttctc 4366
Query: 61 cttagtgtgagaccgttcgtgtctcgttaggtgttcttgcctggcaaaagctctagtaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4365 cttagtgtgagaccgttcgtgtctcgttaggtgttcttgcctggcaaaagctctagtaca 4306
Query: 121 aactttgcaaacgaacaaccttggcttcccactgggagtcaccccgttcaatcgtagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4305 aactttgcaaacgaacaaccttggcttcccactgggagtcaccccgttcaatcgtagatg 4246
Query: 181 atcgggcaacatatcaaatttcttgttggtattgttcgtaatctttgccggtagtgagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4245 atcgggcaacatatcaaatttcttgttggtattgttcgtaatctttgccggtagtgagct 4186
Query: 241 tggttctgctgcagctgtagctgtagctgtagctgtagtgaccgcgctaacgttgccact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4185 tggttctgctgcagctgtagctgtagctgtagctgtagtgaccgcgctaacgttgccact 4126
Query: 301 ccgtggcagcatcaacatatcggcatgctcatcgtcatcatgattagacaaaaaatgttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4125 ccgtggcagcatcaacatatcggcatgctcatcgtcatcatgattagacaaaaaatgttg 4066
Query: 361 cagctgctgagactgagaagtcaggccttgcgcttggttttgcccctgactctgactctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4065 cagctgctgagactgagaagtcaggccttgcgcttggttttgcccctgactctgactctg 4006
Query: 421 tactttcctcttaccgcgaagtcccgtcatattcatctgtcctatcgcatgtgtgtctct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4005 tactttcctcttaccgcgaagtcccgtcatattcatctgtcctatcgcatgtgtgtctct 3946
Query: 481 gctaatattcgaacaggcagcttgcatgacagaatatatatctagccttaaactccccta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3945 gctaatattcgaacaggcagcttgcatgacagaatatatatctagccttaaactccccta 3886
Query: 541 tgatataaatacggacttgtcaaataaaaaagtatttctcaacgcttaaaactaaaacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3885 tgatataaatacggacttgtcaaataaaaaagtatttctcaacgcttaaaactaaaacaa 3826
Query: 601 acaccaaaaaaagtcttgcaatttaaaaggaggaacctttatattctaaagaaaacaaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3825 acaccaaaaaaagtcttgcaatttaaaaggaggaacctttatattctaaagaaaacaaca 3766
Query: 661 cttaataataagacgaaccgtttctaaaaaagtttggaaccgagacctaaacttaatccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3765 cttaataataagacgaaccgtttctaaaaaagtttggaaccgagacctaaacttaatccg 3706
Query: 721 gagccgtccatgtaaattagtatagtcatatgaaactcgcaaacaaaaaaaaaaaaatgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3705 gagccgtccatgtaaattagtatagtcatatgaaactcgcaaacaaaaaaaaaaaaatgt 3646
Query: 781 taaaacctcaagcccgagaaaggtagacgatacatataatagtcaggatactgttgtcat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3645 taaaacctcaagcccgagaaaggtagacgatacatataatagtcaggatactgttgtcat 3586
Query: 841 atatatatttagcatactatatatatgtaacatacataggta 882
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3585 atatatatttagcatactatatatatgtaacatacataggta 3544
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,134
Number of Sequences: 1807
Number of extensions: 14134
Number of successful extensions: 191
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)